Merge pull request #146 from camelot-dev/add-python38-travis

[MRG] Fix test data and drop python2 support
pull/166/head
Vinayak Mehta 2020-05-24 18:31:27 +05:30 committed by GitHub
commit 420d5aa624
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23 changed files with 124 additions and 205 deletions

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@ -8,14 +8,6 @@ install:
- make install
jobs:
include:
- stage: test
script:
- make test
python: '2.7'
- stage: test
script:
- make test
python: '3.5'
- stage: test
script:
- make test
@ -25,8 +17,13 @@ jobs:
- make test
python: '3.7'
dist: xenial
- stage: test
script:
- make test
python: '3.8'
dist: xenial
- stage: coverage
python: '3.6'
python: '3.8'
script:
- make test
- codecov --verbose

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@ -1,7 +1,5 @@
# -*- coding: utf-8 -*-
from __future__ import absolute_import
__all__ = ("main",)

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@ -8,9 +8,9 @@ REVISION = None
def generate_version(version, prerelease=None, revision=None):
version_parts = [".".join(map(str, version))]
if prerelease is not None:
version_parts.append("-{}".format(prerelease))
version_parts.append(f"-{prerelease}")
if revision is not None:
version_parts.append(".{}".format(revision))
version_parts.append(f".{revision}")
return "".join(version_parts)

View File

@ -204,7 +204,7 @@ def lattice(c, *args, **kwargs):
tables = read_pdf(
filepath, pages=pages, flavor="lattice", suppress_stdout=quiet, **kwargs
)
click.echo("Found {} tables".format(tables.n))
click.echo(f"Found {tables.n} tables")
if plot_type is not None:
for table in tables:
plot(table, kind=plot_type)
@ -295,7 +295,7 @@ def stream(c, *args, **kwargs):
tables = read_pdf(
filepath, pages=pages, flavor="stream", suppress_stdout=quiet, **kwargs
)
click.echo("Found {} tables".format(tables.n))
click.echo(f"Found {tables.n} tables")
if plot_type is not None:
for table in tables:
plot(table, kind=plot_type)

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@ -52,13 +52,10 @@ class TextEdge(object):
self.is_valid = False
def __repr__(self):
return "<TextEdge x={} y0={} y1={} align={} valid={}>".format(
round(self.x, 2),
round(self.y0, 2),
round(self.y1, 2),
self.align,
self.is_valid,
)
x = round(self.x, 2)
y0 = round(self.y0, 2)
y1 = round(self.y1, 2)
return f"<TextEdge x={x} y0={y0} y1={y1} align={self.align} valid={self.is_valid}>"
def update_coords(self, x, y0, edge_tol=50):
"""Updates the text edge's x and bottom y coordinates and sets
@ -291,9 +288,11 @@ class Cell(object):
self._text = ""
def __repr__(self):
return "<Cell x1={} y1={} x2={} y2={}>".format(
round(self.x1, 2), round(self.y1, 2), round(self.x2, 2), round(self.y2, 2)
)
x1 = round(self.x1, 2)
y1 = round(self.y1, 2)
x2 = round(self.x2, 2)
y2 = round(self.y2, 2)
return f"<Cell x1={x1} y1={y1} x2={x2} y2={y2}>"
@property
def text(self):
@ -351,7 +350,7 @@ class Table(object):
self.page = None
def __repr__(self):
return "<{} shape={}>".format(self.__class__.__name__, self.shape)
return f"<{self.__class__.__name__} shape={self.shape}>"
def __lt__(self, other):
if self.page == other.page:
@ -612,7 +611,7 @@ class Table(object):
"""
kw = {
"sheet_name": "page-{}-table-{}".format(self.page, self.order),
"sheet_name": f"page-{self.page}-table-{self.order}",
"encoding": "utf-8",
}
kw.update(kwargs)
@ -649,7 +648,7 @@ class Table(object):
kw = {"if_exists": "replace", "index": False}
kw.update(kwargs)
conn = sqlite3.connect(path)
table_name = "page-{}-table-{}".format(self.page, self.order)
table_name = f"page-{self.page}-table-{self.order}"
self.df.to_sql(table_name, conn, **kw)
conn.commit()
conn.close()
@ -670,7 +669,7 @@ class TableList(object):
self._tables = tables
def __repr__(self):
return "<{} n={}>".format(self.__class__.__name__, self.n)
return f"<{self.__class__.__name__} n={self.n}>"
def __len__(self):
return len(self._tables)
@ -680,7 +679,7 @@ class TableList(object):
@staticmethod
def _format_func(table, f):
return getattr(table, "to_{}".format(f))
return getattr(table, f"to_{f}")
@property
def n(self):
@ -691,9 +690,7 @@ class TableList(object):
root = kwargs.get("root")
ext = kwargs.get("ext")
for table in self._tables:
filename = os.path.join(
"{}-page-{}-table-{}{}".format(root, table.page, table.order, ext)
)
filename = f"{root}-page-{table.page}-table-{table.order}{ext}"
filepath = os.path.join(dirname, filename)
to_format = self._format_func(table, f)
to_format(filepath)
@ -706,9 +703,7 @@ class TableList(object):
zipname = os.path.join(os.path.dirname(path), root) + ".zip"
with zipfile.ZipFile(zipname, "w", allowZip64=True) as z:
for table in self._tables:
filename = os.path.join(
"{}-page-{}-table-{}{}".format(root, table.page, table.order, ext)
)
filename = f"{root}-page-{table.page}-table-{table.order}{ext}"
filepath = os.path.join(dirname, filename)
z.write(filepath, os.path.basename(filepath))
@ -741,7 +736,7 @@ class TableList(object):
filepath = os.path.join(dirname, basename)
writer = pd.ExcelWriter(filepath)
for table in self._tables:
sheet_name = "page-{}-table-{}".format(table.page, table.order)
sheet_name = f"page-{table.page}-table-{table.order}"
table.df.to_excel(writer, sheet_name=sheet_name, encoding="utf-8")
writer.save()
if compress:

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@ -81,6 +81,7 @@ def delete_instance(instance):
"""
return libgs.gsapi_delete_instance(instance)
if sys.platform == "win32":
c_stdstream_call_t = WINFUNCTYPE(c_int, gs_main_instance, POINTER(c_char), c_int)
else:
@ -247,7 +248,10 @@ if sys.platform == "win32":
libgs = __win32_finddll()
if not libgs:
import ctypes.util
libgs = ctypes.util.find_library("".join(("gsdll", str(ctypes.sizeof(ctypes.c_voidp) * 8), ".dll"))) # finds in %PATH%
libgs = ctypes.util.find_library(
"".join(("gsdll", str(ctypes.sizeof(ctypes.c_voidp) * 8), ".dll"))
) # finds in %PATH%
if not libgs:
raise RuntimeError("Please make sure that Ghostscript is installed")
libgs = windll.LoadLibrary(libgs)

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@ -106,7 +106,7 @@ class PDFHandler(object):
infile = PdfFileReader(fileobj, strict=False)
if infile.isEncrypted:
infile.decrypt(self.password)
fpath = os.path.join(temp, "page-{0}.pdf".format(page))
fpath = os.path.join(temp, f"page-{page}.pdf")
froot, fext = os.path.splitext(fpath)
p = infile.getPage(page - 1)
outfile = PdfFileWriter()
@ -164,7 +164,7 @@ class PDFHandler(object):
for p in self.pages:
self._save_page(self.filepath, p, tempdir)
pages = [
os.path.join(tempdir, "page-{0}.pdf".format(p)) for p in self.pages
os.path.join(tempdir, f"page-{p}.pdf") for p in self.pages
]
parser = Lattice(**kwargs) if flavor == "lattice" else Stream(**kwargs)
for p in pages:

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@ -1,7 +1,5 @@
# -*- coding: utf-8 -*-
from __future__ import division
import cv2
import numpy as np

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@ -1,6 +1,5 @@
# -*- coding: utf-8 -*-
from __future__ import division
import os
import sys
import copy

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@ -1,6 +1,5 @@
# -*- coding: utf-8 -*-
from __future__ import division
import os
import logging
import warnings
@ -358,7 +357,7 @@ class Stream(BaseParser):
ncols = max(set(elements), key=elements.count)
else:
warnings.warn(
"No tables found in table area {}".format(table_idx + 1)
f"No tables found in table area {table_idx + 1}"
)
cols = [(t.x0, t.x1) for r in rows_grouped if len(r) == ncols for t in r]
cols = self._merge_columns(sorted(cols), column_tol=self.column_tol)
@ -433,19 +432,19 @@ class Stream(BaseParser):
def extract_tables(self, filename, suppress_stdout=False, layout_kwargs={}):
self._generate_layout(filename, layout_kwargs)
base_filename = os.path.basename(self.rootname)
if not suppress_stdout:
logger.info("Processing {}".format(os.path.basename(self.rootname)))
logger.info(f"Processing {base_filename}")
if not self.horizontal_text:
if self.images:
warnings.warn(
"{} is image-based, camelot only works on"
" text-based pages.".format(os.path.basename(self.rootname))
f"{base_filename} is image-based, camelot only works on"
" text-based pages."
)
else:
warnings.warn(
"No tables found on {}".format(os.path.basename(self.rootname))
)
warnings.warn(f"No tables found on {base_filename}")
return []
self._generate_table_bbox()

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@ -35,11 +35,11 @@ class PlotMethods(object):
if table.flavor == "lattice" and kind in ["textedge"]:
raise NotImplementedError(
"Lattice flavor does not support kind='{}'".format(kind)
f"Lattice flavor does not support kind='{kind}'"
)
elif table.flavor == "stream" and kind in ["joint", "line"]:
raise NotImplementedError(
"Stream flavor does not support kind='{}'".format(kind)
f"Stream flavor does not support kind='{kind}'"
)
plot_method = getattr(self, kind)

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@ -1,9 +1,7 @@
# -*- coding: utf-8 -*-
from __future__ import division
import re
import os
import sys
import re
import random
import shutil
import string
@ -29,16 +27,9 @@ from pdfminer.layout import (
LTImage,
)
PY3 = sys.version_info[0] >= 3
if PY3:
from urllib.request import urlopen
from urllib.request import Request, urlopen
from urllib.parse import urlparse as parse_url
from urllib.parse import uses_relative, uses_netloc, uses_params
else:
from urllib2 import urlopen
from urlparse import urlparse as parse_url
from urlparse import uses_relative, uses_netloc, uses_params
_VALID_URLS = set(uses_relative + uses_netloc + uses_params)
@ -88,13 +79,12 @@ def download_url(url):
Temporary filepath.
"""
filename = "{}.pdf".format(random_string(6))
filename = f"{random_string(6)}.pdf"
with tempfile.NamedTemporaryFile("wb", delete=False) as f:
obj = urlopen(url)
if PY3:
headers = {"User-Agent": "Mozilla/5.0"}
request = Request(url, None, headers)
obj = urlopen(request)
content_type = obj.info().get_content_type()
else:
content_type = obj.info().getheader("Content-Type")
if content_type != "application/pdf":
raise NotImplementedError("File format not supported")
f.write(obj.read())
@ -123,9 +113,7 @@ def validate_input(kwargs, flavor="lattice"):
isec = set(parser_kwargs).intersection(set(input_kwargs.keys()))
if isec:
raise ValueError(
"{} cannot be used with flavor='{}'".format(
",".join(sorted(isec)), flavor
)
f"{','.join(sorted(isec))} cannot be used with flavor='{flavor}'"
)
if flavor == "lattice":
@ -423,7 +411,7 @@ def text_strip(text, strip=""):
return text
stripped = re.sub(
r"[{}]".format("".join(map(re.escape, strip))), "", text, re.UNICODE
fr"[{''.join(map(re.escape, strip))}]", "", text, re.UNICODE
)
return stripped
@ -660,9 +648,7 @@ def get_table_index(
text_range = (t.x0, t.x1)
col_range = (table.cols[0][0], table.cols[-1][1])
warnings.warn(
"{} {} does not lie in column range {}".format(
text, text_range, col_range
)
f"{text} {text_range} does not lie in column range {col_range}"
)
r_idx = r
c_idx = lt_col_overlap.index(max(lt_col_overlap))

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@ -71,10 +71,10 @@ def setup_package():
# Trove classifiers
# Full list: https://pypi.python.org/pypi?%3Aaction=list_classifiers
'License :: OSI Approved :: MIT License',
'Programming Language :: Python :: 2.7',
'Programming Language :: Python :: 3.5',
'Programming Language :: Python :: 3.6',
'Programming Language :: Python :: 3.7'
'Programming Language :: Python :: 3.7',
'Programming Language :: Python :: 3.8'
])
try:

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@ -1,2 +1,3 @@
import matplotlib
matplotlib.use('agg')
matplotlib.use("agg")

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@ -1,19 +1,7 @@
# -*- coding: utf-8 -*-
from __future__ import unicode_literals
data_stream = [
[
"",
"Table: 5 Public Health Outlay 2012-13 (Budget Estimates) (Rs. in 000)",
"",
"",
"",
"",
"",
"",
],
["States-A", "Revenue", "", "Capital", "", "Total", "Others(1)", "Total"],
["", "", "", "", "", "Revenue &", "", ""],
["", "Medical &", "Family", "Medical &", "Family", "", "", ""],
@ -829,18 +817,6 @@ data_stream_table_rotated = [
]
data_stream_two_tables_1 = [
[
"[In thousands (11,062.6 represents 11,062,600) For year ending December 31. Based on Uniform Crime Reporting (UCR)",
"",
"",
"",
"",
"",
"",
"",
"",
"",
],
[
"Program. Represents arrests reported (not charged) by 12,910 agencies with a total population of 247,526,916 as estimated",
"",
@ -1300,29 +1276,10 @@ data_stream_two_tables_1 = [
"",
"",
],
[
"",
"Source: U.S. Department of Justice, Federal Bureau of Investigation, Uniform Crime Reports, Arrests Master Files.",
"",
"",
"",
"",
"",
"",
"",
"",
],
]
data_stream_two_tables_2 = [
[
"",
"Source: U.S. Department of Justice, Federal Bureau of Investigation, Uniform Crime Reports, Arrests Master Files.",
"",
"",
"",
"",
],
["Table 325. Arrests by Race: 2009", "", "", "", "", ""],
[
"[Based on Uniform Crime Reporting (UCR) Program. Represents arrests reported (not charged) by 12,371 agencies",
@ -1600,16 +1557,9 @@ data_stream_two_tables_2 = [
"3,950",
],
["1 Except forcible rape and prostitution.", "", "", "", "", ""],
[
"",
"Source: U.S. Department of Justice, Federal Bureau of Investigation, “Crime in the United States, Arrests,” September 2010,",
"",
"",
"",
"",
],
]
data_stream_table_areas = [
["", "One Withholding"],
["Payroll Period", "Allowance"],
@ -1776,18 +1726,7 @@ data_stream_columns = [
]
data_stream_split_text = [
[
"FEB",
"RUAR",
"Y 2014 M27 (BUS)",
"",
"ALPHABETIC LISTING BY T",
"YPE",
"",
"",
"",
"ABLPDM27",
],
["FEB", "RUAR", "Y 2014 M27 (BUS)", "", "", "", "", "", "", ""],
["", "", "", "", "OF ACTIVE LICENSES", "", "", "", "", "3/19/2014"],
["", "", "", "", "OKLAHOMA ABLE COMMIS", "SION", "", "", "", ""],
["LICENSE", "", "", "", "PREMISE", "", "", "", "", ""],
@ -2121,6 +2060,7 @@ data_stream_split_text = [
],
]
data_stream_flag_size = [
[
"States",

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@ -114,31 +114,35 @@ def test_cli_password():
def test_cli_output_format():
with TemporaryDirectory() as tempdir:
infile = os.path.join(testdir, "health.pdf")
outfile = os.path.join(tempdir, "health.{}")
runner = CliRunner()
# json
outfile = os.path.join(tempdir, "health.json")
result = runner.invoke(
cli,
["--format", "json", "--output", outfile.format("json"), "stream", infile],
["--format", "json", "--output", outfile, "stream", infile],
)
assert result.exit_code == 0
# excel
outfile = os.path.join(tempdir, "health.xlsx")
result = runner.invoke(
cli,
["--format", "excel", "--output", outfile.format("xlsx"), "stream", infile],
["--format", "excel", "--output", outfile, "stream", infile],
)
assert result.exit_code == 0
# html
outfile = os.path.join(tempdir, "health.html")
result = runner.invoke(
cli,
["--format", "html", "--output", outfile.format("html"), "stream", infile],
["--format", "html", "--output", outfile, "stream", infile],
)
assert result.exit_code == 0
# zip
outfile = os.path.join(tempdir, "health.csv")
result = runner.invoke(
cli,
[
@ -146,7 +150,7 @@ def test_cli_output_format():
"--format",
"csv",
"--output",
outfile.format("csv"),
outfile,
"stream",
infile,
],

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@ -10,88 +10,93 @@ import camelot
testdir = os.path.dirname(os.path.abspath(__file__))
testdir = os.path.join(testdir, "files")
filename = os.path.join(testdir, 'foo.pdf')
filename = os.path.join(testdir, "foo.pdf")
def test_unknown_flavor():
message = ("Unknown flavor specified."
" Use either 'lattice' or 'stream'")
message = "Unknown flavor specified." " Use either 'lattice' or 'stream'"
with pytest.raises(NotImplementedError, match=message):
tables = camelot.read_pdf(filename, flavor='chocolate')
tables = camelot.read_pdf(filename, flavor="chocolate")
def test_input_kwargs():
message = "columns cannot be used with flavor='lattice'"
with pytest.raises(ValueError, match=message):
tables = camelot.read_pdf(filename, columns=['10,20,30,40'])
tables = camelot.read_pdf(filename, columns=["10,20,30,40"])
def test_unsupported_format():
message = 'File format not supported'
filename = os.path.join(testdir, 'foo.csv')
message = "File format not supported"
filename = os.path.join(testdir, "foo.csv")
with pytest.raises(NotImplementedError, match=message):
tables = camelot.read_pdf(filename)
def test_stream_equal_length():
message = ("Length of table_areas and columns"
" should be equal")
message = "Length of table_areas and columns" " should be equal"
with pytest.raises(ValueError, match=message):
tables = camelot.read_pdf(filename, flavor='stream',
table_areas=['10,20,30,40'], columns=['10,20,30,40', '10,20,30,40'])
tables = camelot.read_pdf(
filename,
flavor="stream",
table_areas=["10,20,30,40"],
columns=["10,20,30,40", "10,20,30,40"],
)
def test_image_warning():
filename = os.path.join(testdir, 'image.pdf')
filename = os.path.join(testdir, "image.pdf")
with warnings.catch_warnings():
warnings.simplefilter('error')
warnings.simplefilter("error")
with pytest.raises(UserWarning) as e:
tables = camelot.read_pdf(filename)
assert str(e.value) == 'page-1 is image-based, camelot only works on text-based pages.'
assert (
str(e.value)
== "page-1 is image-based, camelot only works on text-based pages."
)
def test_no_tables_found():
filename = os.path.join(testdir, 'blank.pdf')
filename = os.path.join(testdir, "blank.pdf")
with warnings.catch_warnings():
warnings.simplefilter('error')
warnings.simplefilter("error")
with pytest.raises(UserWarning) as e:
tables = camelot.read_pdf(filename)
assert str(e.value) == 'No tables found on page-1'
assert str(e.value) == "No tables found on page-1"
def test_no_tables_found_logs_suppressed():
filename = os.path.join(testdir, 'foo.pdf')
filename = os.path.join(testdir, "foo.pdf")
with warnings.catch_warnings():
# the test should fail if any warning is thrown
warnings.simplefilter('error')
warnings.simplefilter("error")
try:
tables = camelot.read_pdf(filename, suppress_stdout=True)
except Warning as e:
warning_text = str(e)
pytest.fail('Unexpected warning: {}'.format(warning_text))
pytest.fail(f"Unexpected warning: {warning_text}")
def test_no_tables_found_warnings_suppressed():
filename = os.path.join(testdir, 'blank.pdf')
filename = os.path.join(testdir, "blank.pdf")
with warnings.catch_warnings():
# the test should fail if any warning is thrown
warnings.simplefilter('error')
warnings.simplefilter("error")
try:
tables = camelot.read_pdf(filename, suppress_stdout=True)
except Warning as e:
warning_text = str(e)
pytest.fail('Unexpected warning: {}'.format(warning_text))
pytest.fail(f"Unexpected warning: {warning_text}")
def test_no_password():
filename = os.path.join(testdir, 'health_protected.pdf')
message = 'file has not been decrypted'
filename = os.path.join(testdir, "health_protected.pdf")
message = "file has not been decrypted"
with pytest.raises(Exception, match=message):
tables = camelot.read_pdf(filename)
def test_bad_password():
filename = os.path.join(testdir, 'health_protected.pdf')
message = 'file has not been decrypted'
filename = os.path.join(testdir, "health_protected.pdf")
message = "file has not been decrypted"
with pytest.raises(Exception, match=message):
tables = camelot.read_pdf(filename, password='wrongpass')
tables = camelot.read_pdf(filename, password="wrongpass")

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@ -11,57 +11,50 @@ testdir = os.path.dirname(os.path.abspath(__file__))
testdir = os.path.join(testdir, "files")
@pytest.mark.mpl_image_compare(
baseline_dir="files/baseline_plots", remove_text=True)
@pytest.mark.mpl_image_compare(baseline_dir="files/baseline_plots", remove_text=True)
def test_text_plot():
filename = os.path.join(testdir, "foo.pdf")
tables = camelot.read_pdf(filename)
return camelot.plot(tables[0], kind='text')
return camelot.plot(tables[0], kind="text")
@pytest.mark.mpl_image_compare(
baseline_dir="files/baseline_plots", remove_text=True)
@pytest.mark.mpl_image_compare(baseline_dir="files/baseline_plots", remove_text=True)
def test_grid_plot():
filename = os.path.join(testdir, "foo.pdf")
tables = camelot.read_pdf(filename)
return camelot.plot(tables[0], kind='grid')
return camelot.plot(tables[0], kind="grid")
@pytest.mark.mpl_image_compare(
baseline_dir="files/baseline_plots", remove_text=True)
@pytest.mark.mpl_image_compare(baseline_dir="files/baseline_plots", remove_text=True)
def test_lattice_contour_plot():
filename = os.path.join(testdir, "foo.pdf")
tables = camelot.read_pdf(filename)
return camelot.plot(tables[0], kind='contour')
return camelot.plot(tables[0], kind="contour")
@pytest.mark.mpl_image_compare(
baseline_dir="files/baseline_plots", remove_text=True)
@pytest.mark.mpl_image_compare(baseline_dir="files/baseline_plots", remove_text=True)
def test_stream_contour_plot():
filename = os.path.join(testdir, "tabula/12s0324.pdf")
tables = camelot.read_pdf(filename, flavor='stream')
return camelot.plot(tables[0], kind='contour')
tables = camelot.read_pdf(filename, flavor="stream")
return camelot.plot(tables[0], kind="contour")
@pytest.mark.mpl_image_compare(
baseline_dir="files/baseline_plots", remove_text=True)
@pytest.mark.mpl_image_compare(baseline_dir="files/baseline_plots", remove_text=True)
def test_line_plot():
filename = os.path.join(testdir, "foo.pdf")
tables = camelot.read_pdf(filename)
return camelot.plot(tables[0], kind='line')
return camelot.plot(tables[0], kind="line")
@pytest.mark.mpl_image_compare(
baseline_dir="files/baseline_plots", remove_text=True)
@pytest.mark.mpl_image_compare(baseline_dir="files/baseline_plots", remove_text=True)
def test_joint_plot():
filename = os.path.join(testdir, "foo.pdf")
tables = camelot.read_pdf(filename)
return camelot.plot(tables[0], kind='joint')
return camelot.plot(tables[0], kind="joint")
@pytest.mark.mpl_image_compare(
baseline_dir="files/baseline_plots", remove_text=True)
@pytest.mark.mpl_image_compare(baseline_dir="files/baseline_plots", remove_text=True)
def test_textedge_plot():
filename = os.path.join(testdir, "tabula/12s0324.pdf")
tables = camelot.read_pdf(filename, flavor='stream')
return camelot.plot(tables[0], kind='textedge')
tables = camelot.read_pdf(filename, flavor="stream")
return camelot.plot(tables[0], kind="textedge")